Unified Wilcoxon-Mann Whitney Test for testing differential expression in qPCR data


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Documentation for package ‘unifiedWMWqPCR’ version 1.36.0

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unifiedWMWqPCR-package Unified Wilcoxon-Mann Whitney Test for qPCR data.
as.matrix-method S3 method as.matrix for uwmwEstimate objects.
as.matrix-method S3 method as.matrix for uwmwRes objects.
as.matrix.uwmwEstimate S3 method as.matrix for uwmwEstimate objects.
as.matrix.uwmwRes S3 method as.matrix for uwmwRes objects.
coef Extract info from uwmwRes and uwmwEstimate objects
coef-method Extract info from uwmwRes and uwmwEstimate objects
esttype Extract info from uwmwRes and uwmwEstimate objects
esttype-method Extract info from uwmwRes and uwmwEstimate objects
forestplot Making a forest plot of the results of uWMW
forestplot-method Making a forest plot of the results of uWMW
forestplot.internal Making a forest plot of the results of uWMW
getEstimate Extract logor, or, odds and percentages from a uwmwRes object
getEstimate-method Extract logor, or, odds and percentages from a uwmwRes object
getOrder Extract info from uwmwRes and uwmwEstimate objects
getOrder-method Extract info from uwmwRes and uwmwEstimate objects
groupinfo Extract info from uwmwRes and uwmwEstimate objects
groupinfo-method Extract info from uwmwRes and uwmwEstimate objects
housekeeping Extract info from uwmwRes and uwmwEstimate objects
housekeeping-method Extract info from uwmwRes and uwmwEstimate objects
is.unsorted Extract info from uwmwRes and uwmwEstimate objects
is.unsorted-method Extract info from uwmwRes and uwmwEstimate objects
length-method Extract info from uwmwRes and uwmwEstimate objects
logor Extract info from uwmwRes and uwmwEstimate objects
logor-method Extract info from uwmwRes and uwmwEstimate objects
names-method Extract info from uwmwRes and uwmwEstimate objects
NBdata Documentation for the dataset NBdata
NBgroups Documentation for the dataset NBdata
NBmat Documentation for the dataset NBdata
oddsRatio Extract info from uwmwRes and uwmwEstimate objects
oddsRatio-method Extract info from uwmwRes and uwmwEstimate objects
order-method Sort and order method for uWMWRes objects
orderedBy Extract info from uwmwRes and uwmwEstimate objects
orderedBy-method Extract info from uwmwRes and uwmwEstimate objects
plot-method Quick forest plot of significantly up- and downregulated features.
pval Extract info from uwmwRes and uwmwEstimate objects
pval-method Extract info from uwmwRes and uwmwEstimate objects
ref Extract info from uwmwRes and uwmwEstimate objects
ref-method Extract info from uwmwRes and uwmwEstimate objects
se Extract info from uwmwRes and uwmwEstimate objects
se-method Extract info from uwmwRes and uwmwEstimate objects
sort Sort and order method for uWMWRes objects
sort-method Sort and order method for uWMWRes objects
type Extract info from uwmwRes and uwmwEstimate objects
type-method Extract info from uwmwRes and uwmwEstimate objects
unifiedWMWqPCR Unified Wilcoxon-Mann Whitney Test for qPCR data.
unorder Sort and order method for uWMWRes objects
unorder-method Sort and order method for uWMWRes objects
uWMW The unified Wilcoxon-Mann-Whitney test for qPCR data
uWMW-method The unified Wilcoxon-Mann-Whitney test for qPCR data
uwmwEstimate The class uwmwEstimate
uwmwEstimate-class The class uwmwEstimate
uWMWqPCR Unified Wilcoxon-Mann Whitney Test for qPCR data.
uwmwRes Class uwmwRes
uwmwRes-class Class uwmwRes
uwmw_Accessors Extract info from uwmwRes and uwmwEstimate objects
uwmw_Extract Extract data from uwmwRes and uwmwEstimate objects.
vcov Extract info from uwmwRes and uwmwEstimate objects
vcov-method Extract info from uwmwRes and uwmwEstimate objects
volcano-par Parameters used for the function volcanoplot
volcanopar Parameters used for the function volcanoplot
volcanoplot Make a volcano plot of the outcome of a uWMW test
volcanoplot-method Make a volcano plot of the outcome of a uWMW test
volcanoplot-par Parameters used for the function volcanoplot
volcanoplotpar Parameters used for the function volcanoplot
zval Extract info from uwmwRes and uwmwEstimate objects
zval-method Extract info from uwmwRes and uwmwEstimate objects
[-method Extract data from uwmwRes and uwmwEstimate objects.